Insertion junction: CLIP2.052903_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052903
Chromosome:chromosome 12
Location:7356989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g557800 (1 of 1) K06875 - programmed cell death protein 5 (PDCD5, TFAR19) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCCCTTCCACCTACCGCTTGGCCTCCTCCTGTGCCTCAATATCCTCC
Internal bar code:AGTAACGTGACTATTAAGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3157
LEAP-Seq percent confirming:93.8144
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTCAACTTCGGTGGTCG
Suggested primer 2:GAGTAAGGAGGGAGGGAGCA