Insertion junction: CLIP2.052938_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052938
Chromosome:chromosome 3
Location:5620114
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185950 (1 of 1) IPR006642//IPR026319 - Zinc finger, Rad18-type putative // Zinc finger C2HC domain-containing protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATACACACACATGTAGCGGGGGTTGCGCGATTTCCGGTTGGTAAGACC
Internal bar code:TTATGGTCCTTTTGTTGACTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3232
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAGAAGTGGCTCAAGGTG
Suggested primer 2:CTCGTCGCCGTAGTAGTCAC