Insertion junction: CLIP2.052938_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.052938
Chromosome:chromosome 3
Location:5620118
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185950 (1 of 1) IPR006642//IPR026319 - Zinc finger, Rad18-type putative // Zinc finger C2HC domain-containing protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGAGTGTGCGCGCGCGTGCGGAGCCGGGATGATGGGGATGGAGAGGC
Internal bar code:TTATGGTCCTTTTGTTGACTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:112
LEAP-Seq percent confirming:4.54545
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGTCGCCGTAGTAGTCAC
Suggested primer 2:ACGAGAAGTGGCTCAAGGTG