Insertion junction: CLIP2.052939_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.052939
Chromosome:chromosome 2
Location:7002373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389578 PSBP5 PsbP-like protein of thylakoid lumen; (1 of 1) PTHR31407//PTHR31407:SF16 - FAMILY NOT NAMED // PSBP DOMAIN-CONTAINING PROTEIN 7, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGTACTTACAAAGTGCCTTGCTGATTGACGTGCTTTGTGTTTCCAAT
Internal bar code:GGAAATAGCGAGAACCCTCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:699
LEAP-Seq percent confirming:11.6279
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:AACCCGGAGTCGTCAAAGTC
Suggested primer 2:CGAGTGCATCATTGTCAGCG