Insertion junction: CLIP2.052944_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052944
Chromosome:chromosome 12
Location:5985853
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534151 EEP9 (1 of 3) PTHR22748:SF4 - DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 2; endonuclease/exonuclease/phosphatase family protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGACCGCGCCTGGCTACTGCGGCTCATGGCGCGCGGCCCGCCGCCGTCG
Internal bar code:CCGCGGGTTCTGAAGGCGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5130
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTCGTGTGGAAATTCCG
Suggested primer 2:CCATGGTCTATGCAGGCACA