Insertion junction: CLIP2.052944_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.052944
Chromosome:chromosome 12
Location:5985854
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534151 EEP9 (1 of 3) PTHR22748:SF4 - DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 2; endonuclease/exonuclease/phosphatase family protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGGTGGGGTCGTAGAGGTGGCGGTAGCTGGCTGCCACGTCACGCCGCT
Internal bar code:TCAACCGTGTCTCAGTAGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1631
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGGTCTATGCAGGCACA
Suggested primer 2:GTGCTCGTGTGGAAATTCCG