Insertion junction: CLIP2.052947_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052947
Chromosome:chromosome 3
Location:4645508
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177007 (1 of 1) PTHR12480:SF6 - JMJC DOMAIN-CONTAINING PROTEIN 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTCCCCCCCCCCCCCCCACACACACACGCGCGCAACCGGCGCATTCCC
Internal bar code:AGTTGTGGTACCCCAGGCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2283
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTCTACGGTTTCCACGG
Suggested primer 2:CAACCACAACTGGCTCAACG