Insertion junction: CLIP2.052953_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052953
Chromosome:chromosome 2
Location:4481970
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g106550 (1 of 1) K12839 - survival of motor neuron-related-splicing factor 30 (SMNDC1, SPF30) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCGAACTCGTGCCGCGACTTCTTGCCGTATTCCGTCATGCCGCGGCC
Internal bar code:CCGCTCGGGGCCTCCATGGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3034
LEAP-Seq percent confirming:98.2759
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAAGATCCGCTTCCAACA
Suggested primer 2:CGAAACCTGCGTGGCATATG