Insertion junction: CLIP2.052957_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052957
Chromosome:chromosome 7
Location:5240751
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00101007

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGTTGCGGTGGTGTGGTTGGTGCGTGGTCGCGTTAGAGCCTTGTTTA
Internal bar code:AACGGACGGTACTTGAGTACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2821
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAAATTCCCCACCCCTCC
Suggested primer 2:ATGCGGTGGCGTACAGTAAA