Insertion junction: CLIP2.052960_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052960
Chromosome:chromosome 3
Location:8152064
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200700 FAP166 (1 of 79) IPR011992 - EF-hand domain pair; Flagellar Associated Protein 166 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACGTAGCTCCACAGTCTAGCTTGGCCTCCCATCCTGCCACCCGCGATG
Internal bar code:TTAGATTGCCCATCTGAGGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2869
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGTGAAGGCTTTCAGTCC
Suggested primer 2:CACGCCTACTCGACATCTCC