Insertion junction: CLIP2.052960_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.052960
Chromosome:chromosome 3
Location:8152075
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200700 FAP166 (1 of 79) IPR011992 - EF-hand domain pair; Flagellar Associated Protein 166 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCTACGTTGATGGGGACGATGCGGTAGTGGCATGTGGGGGCTCCTGGG
Internal bar code:TTAGATTGCCCATCTGAGGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1676
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCCTACTCGACATCTCC
Suggested primer 2:TCCGTGAAGGCTTTCAGTCC