Insertion junction: CLIP2.052965_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052965
Chromosome:chromosome 7
Location:3770616
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g338400 (1 of 1) K14845 - RAT1-interacting protein (RAI1, DOM3Z) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTACTGAACAAACGCCCACTTTGCGGACCCGGTATGCAAACCCCGTATG
Internal bar code:GGCTGGAAGTTGGTCGATGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2923
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCTTCGCTGTGTCCCAAG
Suggested primer 2:GGGTGAGAGGGACGGAAAAG