Insertion junction: CLIP2.052967_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052967
Chromosome:chromosome 17
Location:2700205
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g717200 (1 of 1) PTHR10060:SF24 - DEOXYRIBONUCLEASE TATDN3-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAGGCTATAGATGCAGCCACCTCTCACTAGGCACACACCTCCCCAGCA
Internal bar code:GGCGCAGGGCTGCGAAGAGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:641
LEAP-Seq percent confirming:5.88235
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:64
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:GCACATGCTCTCAACTCCCT
Suggested primer 2:AGCATTTCATGGGGAAGGGG