Insertion junction: CLIP2.052972_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.052972
Chromosome:chromosome 3
Location:6160769
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g190950 TUA1 (1 of 2) K07374 - tubulin alpha (TUBA); Alpha tubulin 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCAGGGGAAGGAGAAGGGAGCTTTTCCTACGCTGGGTTCGCGAGGGGT
Internal bar code:TACATCAGCCGTAGTCTTCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1658
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGCTCCCGTTAAGTCAAT
Suggested primer 2:AGGGTACGAAAACTGGGCTG