Insertion junction: CLIP2.052986_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052986
Chromosome:chromosome 12
Location:8524484
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549300 MIP1 (1 of 2) PTHR19139:SF180 - AQUAPORIN-1; Aquaporin major intrinsic protein 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGCATATGTGTCGGGCATGCGGCTGGGCCTAAACCATGCATGTTTCC
Internal bar code:TGCCAGGAAGCTCTCCAGCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4189
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGAAGGGACTGCTGTAC
Suggested primer 2:GCCGATGTACACCTCACACA