Insertion junction: CLIP2.052989_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052989
Chromosome:chromosome 6
Location:3839604
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278179 (1 of 1) PTHR18937//PTHR18937:SF244 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCTGTGCGTTCTTCTTTTCCGTGTCCGCGTCCGTGGCTATTTTGCGGC
Internal bar code:GCGTCCTCGTGACCGGATTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3924
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCTTGTTGGTGGCTGCAG
Suggested primer 2:ACGCAAGCATTAGGGGGAAA