Insertion junction: CLIP2.052989_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.052989
Chromosome:chromosome 6
Location:3839830
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278179 (1 of 1) PTHR18937//PTHR18937:SF244 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAAGCGCAACCAGACGCTACTGGCGCTGCAGGCGGACCTGGAGATGGC
Internal bar code:GCGTCCTCGTGACCGGATTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1826
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCAAGCATTAGGGGGAAA
Suggested primer 2:GTTCTTGTTGGTGGCTGCAG