Insertion junction: CLIP2.052991_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.052991
Chromosome:chromosome 7
Location:5443544
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g350850 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAAGAGGTCAAAGTTAACCGGCACGTCGGCCAGGCTGCCGTTCGAGGG
Internal bar code:GCTTTAGGTATGTGGGTAAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:781
LEAP-Seq percent confirming:30.9524
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:AGACAAAGATGCTGGAGGCC
Suggested primer 2:GCCAGTTAAGACATGCGCAG