Insertion junction: CLIP2.052993_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052993
Chromosome:mitogenome
Location:2192
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreMt.g802338 nad4,801494,ChrepMp02 NADH dehydrogenase subunit 4; (1 of 1) K03881 - NADH-ubiquinone oxidoreductase chain 4 (ND4) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCTCACATGTCTATGGTTACCCTTGCCATTTTCAGCCAAAGCGAGTT
Internal bar code:CAACACTATGTGCAGCGCTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1877
LEAP-Seq percent confirming:70.9677
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CAACACGGTTGAAAGCCCAG
Suggested primer 2:TGATGCTTCTGGTCACGGTC