Insertion junction: CLIP2.052996_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052996
Chromosome:chromosome 7
Location:2281858
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327750 TRP3 Transient receptor potential ion channel protein; (1 of 6) PTHR31942//PTHR31942:SF1 - FAMILY NOT NAMED // MLO-LIKE PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACACCGTGCCTCCACACCTACCTACATTCCACTCTCAAACCCACCCTC
Internal bar code:ACAAGAGTATCGAACTGCTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3329
LEAP-Seq percent confirming:82.1429
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGATACGCAAGAGCACG
Suggested primer 2:GGAGGTGTTCATCCGGTTGT