Insertion junction: CLIP2.052999_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052999
Chromosome:chromosome 16
Location:6450853
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00152270

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTAAAATGTCGTCATAGACTCGCTCAAGAGTAGCAAATATATTGATAC
Internal bar code:TCTGGTGGGGTTCTTCACGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2176
LEAP-Seq percent confirming:92.0635
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAAGATCTGCACTGAGGC
Suggested primer 2:TCGTGCTTTCGCTGTGTACT