Insertion junction: CLIP2.052999_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052999
Chromosome:chromosome 16
Location:6450860
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00152270

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAAATCACCAAGATCGCTGAGGTCAACATGCATGCTCCACATCCGCAA
Internal bar code:AGGCCAGAAAGGTTTCGTCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:4978
LEAP-Seq percent confirming:93.6508
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTGCTTTCGCTGTGTACT
Suggested primer 2:ACCAAGATCTGCACTGAGGC