Insertion junction: CLIP2.053004_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.053004
Chromosome:chromosome 15
Location:5651809
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801853 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAGAAGGTGTAGCCCGGAACAGTAGTACAGCAGGCCCAAGGGGGAGG
Internal bar code:CCACCTGGTATGGGAAGAACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:177
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CACGGGCTTTCGTTTCGTTT
Suggested primer 2:GTGTGTGTGTGTGTGTGTGG