Insertion junction: CLIP2.053010_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053010
Chromosome:chromosome 11
Location:395516
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467583 (1 of 4) IPR001810//IPR020683 - F-box domain // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGGTTGACAAGCTCCTTGCAGACGCCCAGCTGACCCGCAGCCGCAGC
Internal bar code:TTTCTAGTATGCGTGCGGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2445
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCGACATTGGCTCAGACC
Suggested primer 2:CGCATCCTCGCCTCATTTTG