Insertion junction: CLIP2.053013_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.053013
Chromosome:chromosome 1
Location:2339781
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCGACCAAGACTCCTTTCCCTACCGCCTCCTCACCACCTACTCTCACC
Internal bar code:CAAGGATTTACTCATAGGGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3025
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:GCACAGTTGCTGATGCCAAA
Suggested primer 2:TGAGCCGTCTGTCTGTGTTC