Insertion junction: CLIP2.053017_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.053017
Chromosome:chromosome 17
Location:5735055
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g740800 (1 of 5) PF06742//PF06863 - Protein of unknown function (DUF1214) (DUF1214) // Protein of unknown function (DUF1254) (DUF1254) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGATGGCAACGGTTTCAGGCTCACCTGCACGGCGGAGGCGAGGTACTG
Internal bar code:TTCAACTCTAGTGCGAGATCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1493
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTCAACGTGACGAGTCT
Suggested primer 2:ACATACACACACGTCACCCC