Insertion junction: CLIP2.053024_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053024
Chromosome:chromosome 4
Location:3854424
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g230144 SPT1 Component of serine palmitoyltransferase; (1 of 1) PTHR13693//PTHR13693:SF3 - CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE // LD36009P intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTTTCTCCTTGTGCTGCAGGCCTGGTTTGACGTGATGGACCGCAAGCG
Internal bar code:CGGCCGTGTTACGAGGTACGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1691
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCTCCCTTCCAATCCCC
Suggested primer 2:CAGCCCCCATTCTTGGTCAT