Insertion junction: CLIP2.053026_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.053026
Chromosome:chromosome 12
Location:2716370
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g504900 (1 of 13) PF00646 - F-box domain (F-box) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAGCAGGGGCTGCGGAGGGCAGCGGCGGCGCGTGGGGATAGGGCCAG
Internal bar code:AGTTTCATCAGGGGCTCATGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1796
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGCACCTGAGAAGTTGAC
Suggested primer 2:TTCTGGCGTCATGTCGTCAA