Insertion junction: CLIP2.053033_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053033
Chromosome:chromosome 1
Location:2378867
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g013550 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCCGCAGCGCCGCCCATCGCCGCGGCGCGTCCTCCTCGCGGCTGCTCC
Internal bar code:GGACGGTTCAGTGTCTTATATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4486
LEAP-Seq percent confirming:99.0196
LEAP-Seq n confirming:101
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:102

Suggested primers for confirmation by PCR

Suggested primer 1:TATGCGAGGTGTTGCGAGTT
Suggested primer 2:AGAACTCCTCCCCCGTCTAC