Insertion junction: CLIP2.053046_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053046
Chromosome:mitogenome
Location:10857
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreMt.g802343 ChrepMp07,nad1,801499 NADH dehydrogenase subunit 1; (1 of 1) K03878 - NADH-ubiquinone oxidoreductase chain 1 (ND1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCCCACAATATGCTATGTTGCCGCTATGCTTGATTTTCTTGGTATGT
Internal bar code:AGTTTGGCATATCAGATCCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4281
LEAP-Seq percent confirming:80.9524
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGGCCTTTCACCCCTAGC
Suggested primer 2:GTTTCGGCCCACAAGTTTCC