Insertion junction: CLIP2.053050_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053050
Chromosome:chromosome 6
Location:970109
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g256550 (1 of 41) PTHR10157 - DOPAMINE BETA HYDROXYLASE RELATED intron
Cre06.g256600 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCGGGGGTCCCGGGGGGCATGTGGGTCATGTCATCCATTCCACACACG
Internal bar code:GTGATAGAAAGTGCTTCTTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2272
LEAP-Seq percent confirming:54.1667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGAGGTTTTCAGTGCGG
Suggested primer 2:CACGGACTGTCCCTCTTGTC