Insertion junction: CLIP2.053053_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.053053
Chromosome:chromosome 16
Location:421157
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g693450 ISG-C1 (1 of 32) IPR029062 - Class I glutamine amidotransferase-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTTGCGGAGGCTTCCAGGAAAGCGTTCCTTGTTGAGGGCCGTGCGGCA
Internal bar code:ATGGCTATATGTTACTTAACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:622
LEAP-Seq percent confirming:74.2857
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAGCATGGAGATGAGGGA
Suggested primer 2:GACGATCAGGGCAGATCAGG