Insertion junction: CLIP2.053055_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.053055
Chromosome:chromosome 3
Location:1796303
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g154000 ABCA1A,ABCA1 (1 of 173) IPR029058 - Alpha/Beta hydrolase fold; ABC transporter 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAGGCGCAACGTGCGCATGGAAGCAGATCGGCCGGTCAGGCGCTGTAA
Internal bar code:ACCGAGAACGTAACCATCAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:325
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ACATTCAGCAGCGACCAGAA
Suggested primer 2:GCCAAGATGACAGGCCTCAT