Insertion junction: CLIP2.053056_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.053056
Chromosome:chromosome 12
Location:260811
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g485300 CSV6 Chlamydomonas-specific family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGATAGTGAGGGTGAGGGAAGCACGTGGCGGGGTTGCAGCGCCACACA
Internal bar code:AGGGGGTTTGCCAGTCATCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:685
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TACACGTATGCGCCTAGTGC
Suggested primer 2:GCACTGCAGGCTTTATGGTG