Insertion junction: CLIP2.053067_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053067
Chromosome:chromosome 16
Location:6707603
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673150 HDA14 (1 of 1) PTHR10625:SF124 - HISTONE DEACETYLASE 9; RPD3/HDA1 type histone deacetylase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCGCGCGTGGTACTTGAGCAGCTCCAGGATGGCCAGCACCAGGTCGTT
Internal bar code:GGCTGTTGACAATATCCCGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2602
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTAACACCCCTCACGCTC
Suggested primer 2:ACTCTGCGACAACCTCAGTG