Insertion junction: CLIP2.053074_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053074
Chromosome:chromosome 6
Location:8479902
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g308900 SAM50,TOB55 Sorting assembly machinery 50 kDa subunit; (1 of 2) K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGGGCCGTGTGGGCCCTCAGGCCTTCCACCAACCCGACGCTGCCCCC
Internal bar code:AGCGTTCAAGTTTAGATACAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:921
LEAP-Seq percent confirming:2.7027
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGACAGGCTGTGACGAAA
Suggested primer 2:GGGGCAGATAGAGCAGTGAC