Insertion junction: CLIP2.053082_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053082
Chromosome:chromosome 10
Location:3406640
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g444000 (1 of 2) IPR007743//IPR027417//IPR030385 - Immunity-related GTPases-like // P-loop containing nucleoside triphosphate hydrolase // IRG-type guanine nucleotide-binding (G) domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCTGGGACGTGCCGGGTGCCGGCACCGAGAAGCACACGTAAGTGGCAG
Internal bar code:TAAGAGTATTGAGCTATTCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2246
LEAP-Seq percent confirming:79.5918
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCACTATCGCCCACTAC
Suggested primer 2:CCTGGACTGGAGGACCCATA