Insertion junction: CLIP2.053083_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053083
Chromosome:chromosome 12
Location:5938672
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533800 CYN22 Cyclophilin 22; (1 of 1) K09567 - peptidyl-prolyl isomerase H (cyclophilin H) (PPIH, CYPH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGCACTAGCTGCGGCGTTGGTGGGGTTGCACGCCGCGCTTTGACAAGG
Internal bar code:TCCATTTAGTTTGCGATAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2259
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGACAGAGTACCGTGCCAAA
Suggested primer 2:CGTGCAAAGAGGGCCTCTAA