Insertion junction: CLIP2.053090_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053090
Chromosome:chromosome 17
Location:1677869
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708000 FAP260 Membrane-associated Flagellar Associated Protein 260; (1 of 11) PF13426 - PAS domain (PAS_9) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAACAGAACCAAACAGTGCAGGCGGCGGTATTTGGGGTGCTCTACACG
Internal bar code:GTGTTTCTACTCCCACCCACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:5306
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGTCAATGGCCCATCCTG
Suggested primer 2:TTCAGACGCAACGCAACTTG