Insertion junction: CLIP2.053090_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053090
Chromosome:chromosome 17
Location:1677870
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708000 FAP260 Membrane-associated Flagellar Associated Protein 260; (1 of 11) PF13426 - PAS domain (PAS_9) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGTCGTTGGCTCCGACATCGCCTCCGCCACCCGCACCCGCCCTGCGTA
Internal bar code:TAGGCAGTTTCAAGGTCAGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2790
LEAP-Seq percent confirming:55.3191
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAGACGCAACGCAACTTG
Suggested primer 2:AGTGTCAATGGCCCATCCTG