Insertion junction: CLIP2.053092_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053092
Chromosome:chromosome 16
Location:1634993
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654350 SPL4 (1 of 1) K13102 - DNA/RNA-binding protein KIN17 (KIN); Splicing factor-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAAGGAGCGGGGCCAGGCCTTGGGGCCAGGGAACTCAGGGAAGCGCAT
Internal bar code:CTACGTGACGGGAGCGTTCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1676
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGAAGCAATGTCGCGATG
Suggested primer 2:CTCACCGATGATACCTGCCC