Insertion junction: CLIP2.053102_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053102
Chromosome:chromosome 11
Location:910747
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467654 (1 of 1) K13117 - ATP-dependent RNA helicase DDX35 [EC:3.6.4.13] (DHX35) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACCCACACCCACACACCCCACACACCCACCTGCGTACAGCGGCAGTG
Internal bar code:TGCATCAAGGTTAAGATTGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:395
LEAP-Seq percent confirming:46.8085
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TAAAACCAGGACCGTGACCG
Suggested primer 2:GTGGCAGTGCGTTGAAACAT