Insertion junction: CLIP2.053118_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.053118
Chromosome:chromosome 17
Location:4052806
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728650 FAP196 (1 of 2) PTHR13720//PTHR13720:SF14 - WD-40 REPEAT PROTEIN // WD REPEAT-CONTAINING PROTEIN 16; Flagellar Associated Protein 196 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCAAGCACGGCCTGGAGCCCGGCAAGGTGAGGGCGGCGCATGGAACT
Internal bar code:GGATTTATGCAGGCCTTAGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:696
LEAP-Seq percent confirming:10.6383
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGACTCGTGACCCCATC
Suggested primer 2:ATACCTTTGTGCCCGGTGAG