Insertion junction: CLIP2.053129_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053129
Chromosome:chromosome 2
Location:239638
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g074626 CSB11 (1 of 1) IPR000104//IPR010095//IPR013083 - Antifreeze protein, type I // Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type; {"Probable transposon-derived protein of Chlamydomonas-Specific family B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGATTGCAATTGCCGGTGGGTGGGTGGGCCGCTCCAGGGTTTATGCCT
Internal bar code:CGGGTGGCAGGGAAGTTGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1295
LEAP-Seq percent confirming:13.6364
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTATCAACCCAGCCACCT
Suggested primer 2:CAGCACAGTTGTCAACAGCC