Insertion junction: CLIP2.053132_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053132
Chromosome:chromosome 12
Location:8606671
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g548450 GT90-24,GT90F24 (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90); GT90 family protein 24 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCACGACCCCAGCGGCGCCGGCTCCAGCGGCGGCCAGGCATGCCGCACA
Internal bar code:ATGAATGCAGGCCGTGACTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1008
LEAP-Seq percent confirming:88.5714
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAGTGAGGAAGACCCCGG
Suggested primer 2:ATGTGTTCCCTCACGCACAT