Insertion junction: CLIP2.053141_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053141
Chromosome:chromosome 12
Location:6661641
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00110460

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGCAAGGCAGGTGTCCCCACCCTTGAATTGGCATGCACGCGGGCATAA
Internal bar code:ACGTAGAGGAAAATACGCAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2543
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTTTGCTGGCTCGCTATC
Suggested primer 2:CGTGTGCTATGGGGAAGTGT