Insertion junction: CLIP2.053142_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053142
Chromosome:chromosome 9
Location:847094
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403650 (1 of 9) IPR000719//IPR002290//IPR011009//IPR020635//IPR027916 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // Protein kinase-like domain, Apicomplexa intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGACTCCACAGGCCAGCTGCACGCACTCGGACACGGACGTGGTCCTCAA
Internal bar code:GAAAGAAATTTCTTGCTATTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2237
LEAP-Seq percent confirming:61.3636
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCACCAGGATATCGCCC
Suggested primer 2:AAGGACCCGTCTCTGATGGA