Insertion junction: CLIP2.053143_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053143
Chromosome:chromosome 16
Location:7472803
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g681802 (1 of 2) PF00069//PF01590//PF07714 - Protein kinase domain (Pkinase) // GAF domain (GAF) // Protein tyrosine kinase (Pkinase_Tyr) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGATCTGCACGCGCTCCCACACCCACCTGCGTGCCCAAAATCGCCTCC
Internal bar code:GAGGTCCCGCAAAGTGGAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1194
LEAP-Seq percent confirming:42.5532
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTCAAAACGACTGCTGC
Suggested primer 2:GTACAACTTCGGTCCCGTGT