Insertion junction: CLIP2.053143_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053143
Chromosome:chromosome 16
Location:7472812
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g681802 (1 of 2) PF00069//PF01590//PF07714 - Protein kinase domain (Pkinase) // GAF domain (GAF) // Protein tyrosine kinase (Pkinase_Tyr) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTACGTAGATCTGCATTTGTGACACAAGCCATTGTAGCTGTTCCAAG
Internal bar code:GCGGGGTGTAGTCGTCACGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1579
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GTACAACTTCGGTCCCGTGT
Suggested primer 2:CCCTTCAAAACGACTGCTGC