Insertion junction: CLIP2.053144_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053144
Chromosome:chromosome 7
Location:5009366
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g347400 (1 of 2) K11135 - Pin2-interacting protein X1 (PINX1) intron
Cre07.g347450 (1 of 4) PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTACACCATGCGCGCTGGGTGGGATTCTAGTGCACGCGAAATCACTCGC
Internal bar code:GTTGGTCGAGGTGGCATGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2530
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCTTGTCCTTTTTGCCC
Suggested primer 2:GCAAGAGCAAGCACAACGAA